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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST054687
species: Triticum aestivum
source: PMRD, original name: tae-miR319b

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGAGTGAAGGGAGCTCCA

miRNA*
 CAGCTCTTCCAAGA

mismatches: 2
bulges: 6
View larger
pre-miRNA
 TGAAGCAGCTCTTCCAAGAGACCGCTGTTCCTTGGCGACACACACTCCGACTTCACTGACGGAGTTGCTGTCGGAGACTGAAGGTAGGGATCAACCAACT
CCGTAGGCTGCATCGCAGGAGCCACGGTATACTTGAGCCAGCTATTCGGATCAGATTCGGTATCTTGGAGTGAAGGGAGCTCCA

dot-bracket secondary structure
....(.(((((((((((((.(((((((.(((....(((((((.((((((.(......).)))))))).))))).........(((.((..((((......
((((.((((.(......).)))))))).....)))).)).)))....))).)))...)))).)))))))......)))))).).


SIMILARITIES
miRBase gma-MIR159b: 0.0006

PMRD sof-miR319c: 6e-47

microPC miR159: 0.0006		UniProt sp|Q0JIC2|GAM1_ORYSJ: 6e-27

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
degradome data
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